Yasuhiro Inoue, Taiji Adachi: search on Z-Library

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1

Advances in Experiments and Modeling in Micro- and Nano-Biomechanics: A Mini Review

Mian Long, Masaaki Sato, Chwee Teck Lim, Jianhua Wu, Taiji Adachi, Yasuhiro Inoue

Journal:

Cellular and Molecular Bioengineering

Year:

2011

Language:

english

File:

PDF, 2.42 MB

english, 2011

2

Simulations of dynamics of actin filaments by remodeling them in shearflows

Yasuhiro Inoue, Takeji Deji, Yoshitaka Shimada, Masaki Hojo, Taiji Adachi

Journal:

Computers in Biology and Medicine

Year:

2010

Language:

english

File:

PDF, 766 KB

english, 2010

3

Evaluation of extensional and torsional stiffness of single actin filaments by molecular dynamics analysis

Shinji Matsushita, Taiji Adachi, Yasuhiro Inoue, Masaki Hojo, Masahiro Sokabe

Journal:

Journal of Biomechanics

Year:

2010

Language:

english

File:

PDF, 1.69 MB

english, 2010

4

Effect of tensile force on the mechanical behavior of actin filaments

Shinji Matsushita, Yasuhiro Inoue, Masaki Hojo, Masahiro Sokabe, Taiji Adachi

Journal:

Journal of Biomechanics

Year:

2011

Language:

english

File:

PDF, 1.66 MB

english, 2011

5

Modeling myosin-dependent rearrangement and force generation in an actomyosin network

Yasuhiro Inoue, Shunsuke Tsuda, Koji Nakagawa, Masaki Hojo, Taiji Adachi

Journal:

Journal of Theoretical Biology

Year:

2011

Language:

english

File:

PDF, 1.09 MB

english, 2011

6

Coarse-grained Brownian ratchet model of membrane protrusion on cellular scale

Yasuhiro Inoue, Taiji Adachi

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2011

Language:

english

File:

PDF, 466 KB

english, 2011

7

Quantitative analysis of extension–torsion coupling of actin filaments

Shinji Matsushita, Yasuhiro Inoue, Taiji Adachi

Journal:

Biochemical and Biophysical Research Communications

Year:

2012

Language:

english

File:

PDF, 337 KB

english, 2012

8

A Thermodynamic Model Describing the Mechanosensitivity of Actin-cofilin Binding

Inoue, Yasuhiro, Adachi, Taiji, Hojo, Masaki

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 50 KB

english, 2009

9

Thermodynamic Model Study on the Modulation of Binding Affinity between Actin Filament and its Regulatory Proteins in Response to Mechanical Stresses

Inoue, Yasuhiro, Adachi, Taiji, Hojo, Masaki

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 33 KB

english, 2010

10

Role of the Actin–Myosin Catch Bond on Actomyosin Aggregate Formation

Yasuhiro Inoue, Taiji Adachi

Journal:

Cellular and Molecular Bioengineering

Year:

2013

Language:

english

File:

PDF, 1.39 MB

english, 2013

11

Reversible network reconnection model for simulating large deformation in dynamic tissue morphogenesis

Satoru Okuda, Yasuhiro Inoue, Mototsugu Eiraku, Yoshiki Sasai, Taiji Adachi

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2013

Language:

english

File:

PDF, 1.02 MB

english, 2013

12

Modeling cell proliferation for simulating three-dimensional tissue morphogenesis based on a reversible network reconnection framework

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Sasai, Yoshiki, Adachi, Taiji

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2013

Language:

english

File:

PDF, 951 KB

english, 2013

13

Legislation

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Sasai, Yoshiki, Adachi, Taiji

Journal:

Archives des Maladies Professionnelles et de l'Environnement

Year:

2010

Language:

french

File:

PDF, 173 KB

french, 2010

14

Apical contractility in growing epithelium supports robust maintenance of smooth curvatures against cell-division-induced mechanical disturbance

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Sasai, Yoshiki, Adachi, Taiji

Journal:

Journal of Biomechanics

Year:

2013

Language:

english

File:

PDF, 3.63 MB

english, 2013

15

Modeling and Simulation of Myosin-Dependent Rearrangement and Force Generation in an Actomyosin Network

Inoue, Yasuhiro, Tsuda, Shunsuke, Nakagawa, Koji, Hojo, Masaki, Adachi, Taiji

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 38 KB

english, 2012

16

Molecular Dynamics Analysis of Coupling Behaviors Between Extension and Torsion of Actin Filaments

Matsushita, Shinji, Inoue, Yasuhiro, Adachi, Taiji

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 80 KB

english, 2012

17

Simulation of Membrane Protrusion on Cellular Scale using Coarse-Grained Brownian Ratchet Model

Inoue, Yasuhiro, Adachi, Taiji

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 82 KB

english, 2011

18

Vertex dynamics simulations of viscosity-dependent deformation during tissue morphogenesis

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Adachi, Taiji, Sasai, Yoshiki

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2015

Language:

english

File:

PDF, 4.41 MB

english, 2015

19

Modeling cell apoptosis for simulating three-dimensional multicellular morphogenesis based on a reversible network reconnection framework

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Adachi, Taiji, Sasai, Yoshiki

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2016

Language:

english

File:

PDF, 8 KB

english, 2016

20

Mechanical roles of apical constriction, cell elongation, and cell migration during neural tube formation inXenopus

Inoue, Yasuhiro, Suzuki, Makoto, Watanabe, Tadashi, Yasue, Naoko, Tateo, Itsuki, Adachi, Taiji, Ueno, Naoto

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2016

Language:

english

File:

PDF, 2.70 MB

english, 2016

21

Three-Dimensional Vertex Simulation on Smooth Surface Maintenance of Growing Epithelial Tissue Based on Intercellular Mechano-Feedback

Enomoto, Yoshihide, Inoue, Yasuhiro, Yonemura, Shigenobu, Adachi, Taiji

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 40 KB

english, 2016

22

Brownian dynamics simulation study on force–velocity relation in actin-based membrane protrusion

Inoue, Yasuhiro, Deji, Takeji, Adachi, Taiji

Journal:

Computational Particle Mechanics

Year:

2015

Language:

english

File:

PDF, 3.78 MB

english, 2015

23

Mechanosensitive kinetic preference of actin-binding protein to actin filament

Inoue, Yasuhiro, Adachi, Taiji

Journal:

Physical Review E

Year:

2016

Language:

english

File:

PDF, 625 KB

english, 2016

24

Mechanical role of the spatial patterns of contractile cells in invagination of growing epithelial tissue

Inoue, Yasuhiro, Watanabe, Tadashi, Okuda, Satoru, Adachi, Taiji

Journal:

Development, Growth & Differentiation

Year:

2017

Language:

english

File:

PDF, 2.20 MB

english, 2017

25

Combining Turing and 3D vertex models reproduces autonomous multicellular morphogenesis with undulation, tubulation, and branching

Okuda, Satoru, Miura, Takashi, Inoue, Yasuhiro, Adachi, Taiji, Eiraku, Mototsugu

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 3.20 MB

english, 2018

26

Approach Behavior of Binding Proteins Toward Actin Filament : Brownian Dynamics Simulation

ADACHI, Taiji, SHIMADA, Yoshitaka, INOUE, Yasuhiro, HOJO, Masaki

Year:

2010

Language:

english

File:

PDF, 1.18 MB

english, 2010

27

S15A3 Multiscale Modeling and Simulation of Actin Filament Dynamics(Mutli-scale simulations for understanding biological phenomena)

Adachi, Taiji, Inoue, Yasuhiro, Shimada, Yoshitaka, Matsushita, Shinji, Hojo, Masaki

Journal:

Seibutsu Butsuri

Year:

2007

File:

PDF, 198 KB

2007

28

2SA3-03 Mechanical Behavior of Actin Filaments : Molecular Dynamics Simulation Study(2SA3 Structural and functional analysis of actin filament dynamics,The 47th Annual Meeting of the Biophysical Society of Japan)

Adachi, Taiji, Matsushita, Shinji, Inoue, Yasuhiro, Hojo, Masaki, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 247 KB

english, 2009

29

1P-177 Thermodynamics study on torsion induced inhibition of cofilin binding to actin filament(The 46th Annual Meeting of the Biophysical Society of Japan)

Inoue, Yasuhiro, Adachi, Taiji, Hojo, Masaki

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 281 KB

english, 2008

30

1P-155 Thermodynamic investigation of modulation of binding affinity between cytoskeleton and its regulatory proteins in response to mechanical stresses(Cell biology, The 47th Annual Meeting of the Biophysical Society of Japan)

Inoue, Yasuhiro, Adachi, Taiji, Hojo, Masaki

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 244 KB

english, 2009

31

3P035 Tensile Force Suppresses Torsional Motions of Individual Actin Subunits(Protein: Structure & Function,The 48th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Shinji, Inoue, Yasuhiro, Hojo, Masaki, Sokabe, Masahiro, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 230 KB

english, 2010

32

1PT219 Simulations of large deformation during tissue morphogenesis using reversible network reconnection model(The 50th Annual Meeting of the Biophysical Society of Japan)

Okuda, Satoru, Inoue, Yasuhiro, Eiraku, Mototsugu, Sasai, Yoshiki, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 209 KB

english, 2012

33

Three-dimensional vertex model for simulating multicellular morphogenesis

Okuda, Satoru, Inoue, Yasuhiro, Adachi, Taiji

Journal:

Biophysics and Physicobiology

Year:

2015

Language:

english

File:

PDF, 3.48 MB

english, 2015

34

2P-009 Effects of tensile force on mechanical properties of actin filament(Protein:Structure,The 47th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Shinji, Adachi, Taiji, Inoue, Yasuhiro, Hojo, Masaki, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 242 KB

english, 2009

35

1PT133 Molecular dynamics model of cofilactin filament(The 50th Annual Meeting of the Biophysical Society of Japan)

Fujii, Tetsuya, Inoue, Yasuhiro, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 211 KB

english, 2012

36

1P221 Modeling and simulation of dynamic reconstructing network of stress fibers with mechanical sensing through focal adhesions(Cell biology,The 48th Annual Meeting of the Biophysical Society of Japan)

Inoue, Yasuhiro, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 235 KB

english, 2010

37

2SEA-04 Computational biophysics on epithelial tissue deformation : from molecular to tissue scale(2SEA Biophysical views in structural cell biology,Symposium,The 51th Annual Meeting of the Biophysical Society of Japan)

Inoue, Yasuhiro, Okuda, Satoru, Fujii, Tetsuya, Ohto, Kohei, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 691 KB

english, 2013

38

2P-045 Stiffness Evaluation of Actin Filament by Molecular Dynamics Analysis(The 46th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Shinji, Adachi, Taiji, Inoue, Yasuhiro, Hojo, Masaki, Sokabe, Masahiro

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 298 KB

english, 2008

39

Publisher Correction: Combining Turing and 3D vertex models reproduces autonomous multicellular morphogenesis with undulation, tubulation, and branching

Okuda, Satoru, Miura, Takashi, Inoue, Yasuhiro, Adachi, Taiji, Eiraku, Mototsugu

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 1.02 MB

english, 2018

40

3D1558 Extension-torsion coupling behavior of single actin filament(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Matsushita, Shinji, Inoue, Yasuhiro, Sokabe, Masahiro, Adachi, Taiji

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 251 KB

english, 2011

41

An energy landscape approach to understanding variety and robustness in tissue morphogenesis

Takeda, Hironori, Kameo, Yoshitaka, Inoue, Yasuhiro, Adachi, Taiji

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2019

Language:

english

File:

PDF, 1.68 MB

english, 2019

42

Epithelial tissue folding pattern in confined geometry

Inoue, Yasuhiro, Tateo, Itsuki, Adachi, Taiji

Journal:

Biomechanics and Modeling in Mechanobiology

Year:

2019

Language:

english

File:

PDF, 1.81 MB

english, 2019